Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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9 of 6,223 resources
Prokka: rapid prokaryotic genome annotation. Prokka is one of the most cited annotation command line tools for microbial genome annotations.
International association of users & developers of open source Perl tools for bioinformatics, genomics and life sciences.
CLIFinder is a Galaxy tool designed to identify potential L1 Chimeric Transcripts from RNA-seq data by analyzing paired-end reads in the human genome. It allows customization to detect transcripts initiated by different repeat elements.
NOVOPlasty - The organelle assembler and heteroplasmy caller. NOVOPlasty is a de novo assembler and heteroplasmy/variance caller for short circular genomes..
MITObim - mitochondrial baiting and iterative mapping
GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools
Flexible circular visualization of genome-associated data with BioPerl and SVG.
Perl package for circular plots, which are well suited for genomic rearrangements.