BRAKER3 (Nature Protocols 2023)
github.com/gaius-augustus/brakerFully automated eukaryotic genome annotation pipeline combining self-trained GeneMark-ETP with machine-learned AUGUSTUS parameters to predict protein-coding gene structures from RNA-seq and protein homology evidence, a standard annotation engine in animal, plant, and fungal genome projects (University of Greifswald, 471+ stars, Artistic License 1.0, actively maintained)
Sourced from
- GitHub — github.com/gaius-augustus/braker
- Awesome AI for Science — github.com/gaius-augustus/braker
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