Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

162 of 7,765 resources matching “protein”

Showing 1–50

Sage-SciPerception Scientific perception for language models · 书生·元征 Connect

Active592 days ago

A DNA annotation model from the Carbon family.

Active1.1K4 days ago
Python

A PyTorch reference implementation of the tokenizer described in the

Active05 days ago

Sequence and structure, designed together.Baker Lab × NVIDIA GenAIR Project page

Active12.1K1 week ago

Drugs scaffold decoration, and CrossDocked scaffold decoration in protein pockets.

Active01 week ago

measure the binding of transcription factors and other DNA-associated proteins.

Active01 week ago

Blog | Hugging Face Bio | Code

Active4.5K1 week ago
Python

protein binders with RFD4-Proteina entirely on a MacBook: target

Active01 week ago
Python

westlake-repl/Pinal

by westlake-repl

protein design framework that translates human design intent into novel

Active2701 week ago

Blog | Carbon-X | Carbon-X-Base | Hugging Face Bio | Code

Active3831 week ago
Python

*GenerRNA is a PFN™ generative pre-trained language model for

Active01 week ago

This U‑Net model predicts tilt, z scanner drift, and

Active02 weeks ago

Sequence and structure, designed together.Baker Lab × NVIDIA GenAIR Project page

Active3362 weeks ago
Python

A System-1 decision model for biomedicine, pharma and clinical

Active5933 weeks ago
Python

Trained checkpoints of CausalBind.

Active03 weeks ago

proteins. Introduced in Zatom-2: Multitask Pretraining on Atomistic Data

Active04 weeks ago

A domain-adapted Qwen3.5-9B for aging and longevity biology. L

Active4571 month ago
Python

protein language model that has learned the rules of protein

Active611 month ago
Python

Contrastive LEarning with Soft Targets from TCRdist. Checkpoint SCEPTR6LACsoft800k20ep_bs1024

Active121 month ago

protein's 3D subcellular localization volume from a matched nuclear

Active01 month ago

This model card provides an overview of the intended use

Active1.1K1 month ago
Python

state-of-the-art protein language model trained on billions of protein sequences…

Active19.8K1 month ago
Python

state-of-the-art protein language model trained on billions of protein sequences…

Active19.8K1 month ago
Python

state-of-the-art protein language model trained on billions of protein sequences…

Active19.8K1 month ago
Python

protein language model that has learned the rules of protein

Active94.7K1 month ago
Python

protein language model that has learned the rules of protein

Active15K1 month ago
Python

protein language model that has learned the rules of protein

Active217.6K1 month ago
Python

protein structure prediction and design that defines a new frontier

Active277.8K1 month ago
Python

protein structure prediction and design that defines a new frontier

Active181.7K1 month ago
Python

# Geneformer Geneformer is a foundational transformer model pretrained on a

Active2.1K1 month ago
Python

See the upstream model card for full details, training data

Active2151 month ago
Python

The locus-to-gene (L2G) model prioritises likely causal genes

Active02 months ago

Model for Latent Space Optimization and Generation of Proteins - github repo

Active02 months ago

Senba is a source-anchored adaptation of MarS-FM (Valence

Active02 months ago

provides the pretrained Protenix v2 model weights for protein structure prediction.

Active02 months ago

Many full-length RNAs, particularly mRNAs, exceed the ~1K context

Active02 months ago

OmniTCR is a component-aware autoregressive foundation model for learning

Active02 months ago
Python

PertMind is a biological language model built around a central

Active5032 months ago
Python

protein language model for the phosphotransferase superfamily (EC 2.7.-: protein

Active822 months ago
Python

This model is a fine-tuned version of ESMC-600M

Active252 months ago

!OpenDDE banner

Active10.7K2 months ago

protein variant classifier that predicts whether a mutated protein sequence

Active702 months ago
Python

UBio-MolFM is a foundation-model suite for molecular modeling

Active92 months ago

protein embeddings where biological similarity maps to embedding proximity. Intended

Active483 months ago
Python

protein secondary structure prediction. It processes raw single amino acid

Active03 months ago

protein–ligand binding-affinity model. Given a protein sequence and a ligand

Active86.3K3 months ago

💻 GitHub Repo • 🤗 Model Collections • 📖 MemSFT Paper

Active1323 months ago

ProtSent-V2 35M plus one more contrastive pass on a

Active193 months ago
Python

protein embeddings where biological similarity maps to embedding proximity. Intended

Active223 months ago
Python

yields a protein-protein association network without task-specific training.

Active03 months ago