Find open-source science resources

METEOR is a plateform for quantitative metagenomics profiling of complex

Sage-SciPerception Scientific perception for language models · 书生·元征 Connect

A DNA annotation model from the Carbon family.

OpenOncology is an open-source platform for precision oncology, designed

OpusTaxa is an open-source Snakemake workflow for the end

A PyTorch reference implementation of the tokenizer described in the

Processes 96-well plate absorbance data through blank subtraction, regression

Fully open-source (Apache 2.0) biomolecular structure prediction reproducing AlphaFold3

protein functions by calculating associations between expression patterns in multi

Sequence and structure, designed together.Baker Lab × NVIDIA GenAIR Project page

Deep learning framework for molecular docking extending AutoDock Vina with

protein representation learning, providing standardized interfaces for pre-training and diverse

Drugs scaffold decoration, and CrossDocked scaffold decoration in protein pockets.

Plans geometric serial dilution series for molecular biology and biochemistry

protein entries, plus dilution and ligation calculation modes through one API-backed

Performs laboratory unit conversions across molarity, OD600 cell density, C

measure the binding of transcription factors and other DNA-associated proteins.

protein language models (300M/600M/6B) trained on billions of protein sequences

Pythonic access to FASTA files.

Blog | Hugging Face Bio | Code

DiscrimAlign is a statistical model designed for discriminative learning of

protein binders with RFD4-Proteina entirely on a MacBook: target

RFdiffusion is an open source method for structure generation, with

protein design framework that translates human design intent into novel

NovoTax is an end-to-end pipeline designed to identify

Blog | Carbon-X | Carbon-X-Base | Hugging Face Bio | Code

Workflow optimized for the analysis of rare diseases, designed to

Democratizing AI scientists by transforming any LLM into research systems

Provides a consistent interface for downloading, storing, and accessing immune

search and clustering suite for protein and nucleotide sequence sets.

*GenerRNA is a PFN™ generative pre-trained language model for

scientific tasks including DNA manipulation, literature search, and protein engineering

Comprehensive collection of 125+ ready-to-use scientific skill modules

Molecular dynamics in JAX

TransformerEngine-accelerated checkpoints and training recipes for scaling biological foundation

protein binder design with test-time optimization, SOTA on binder

RFantibody is a pipeline for structure-based de novo antibody

proteins. This package contains useful functions to analyze patterns of paired

This U‑Net model predicts tilt, z scanner drift, and

197 bioinformatics and life science skills for Claude Code and

Open-source hybrid scientific research agent and workbench replicating Claude

Sequence and structure, designed together.Baker Lab × NVIDIA GenAIR Project page

High-accuracy RAG for scientific PDFs with citation support, agentic

AlphaFast is a framework designed to accelerate the Multiple Sequence

AlloPipe is a bioinformatics tool designed to identify candidate minor

Autonomous AI scientist research

Autonomous ML experimentation for biomedical data.

A System-1 decision model for biomedicine, pharma and clinical

PinPath enables flexible visualization of (omics) data onto pathways diagrams

plot protein-protein interaction networks, all from inside of R.