pyBedTools

Cython + HTSlib == fast VCF parsing; even faster parsing than pyVCF.

A VCF Parser for Python.

Galaxy workflow for BlockClust pipeline.

A Python script that converts positional information from a SAM dataset into interval format with 0-based start and 1-based end. CIGAR string of SAM format is used to compute the end coordinate.

Pythonic access to FASTA files.

Python wrapper for [samtools](https://github.com/samtools/samtools).