duttaprat/DeepVRegulome
https://huggingface.co/duttaprat/DeepVRegulome464 fine-tuned DNABERT models for regulatory variant effect prediction
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- HuggingFace — duttaprat/DeepVRegulome
Related resources
This 1,120,772,224-parameter nucleotide-level causal language model is a member of the eight-model MarinDNA v0.5 parameter-scaling ladder developed with Marin. This repository contains only the final step-215573 checkpoint from run dna-bolinas-scaling-v0.5-h1920-p1B-0dc6f4, with its tokenizer…
zhihan1996/DNA_bert_4
by zhihan1996HantaBERT/HantaBERT
by HantaBERTHantaBERT fine-tunes DNABERT-2 on hantavirus RNA sequences for three simultaneous classification tasks: species/lineage, host, and geographic origin. A single forward pass produces predictions for all three tasks along with a 768-dimensional embedding suitable for phylogenetic visualization.