Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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16 of 6,573 resources
Tools for adding mutations to existing `.bam` files, used for testing mutation callers.
Utilities for working with CSV/Tab-delimited files.
GFF and GTF file manipulation and interconversion.
FASTQ and SAM quality control using Python.
Batteries included genomic analysis pipeline for variant and RNA-Seq analysis, structural variant calling, annotation, and prediction.
Resources on ChIP-seq data which include papers, methods, links to software, and analysis.
Easily submitting PBS jobs with script template. Multiple input files supported.
Go Get Data; A command line interface for obtaining genomic data.
[@crazyhottommy](https://github.com/crazyhottommy)'s notes on various steps and considerations when doing RNA-seq analysis.
Computation Pipeline library for python widely used in science and bioinformatics.
Easy-to-use DNA sequence visualization tool that turns FASTA files into browser-based visualizations.
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data.