Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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15 of 5,923 resources
A haplotype-resolved assembler for accurate Hifi reads.
A Flexible Model For Record Linkage
The modern C++ library for sequence analysis.
Structural variant discovery by integrated paired-end and split-read analysis.
A collection of object-oriented software tools for problems involving chemical kinetics, thermodynamics, and transport processes.
A small <720Kb C++ windows utility. That allows you to load Ancestry, 23andMe, FTDNA, or Genes for Good RAW DNA files search them, merge them. covert them to Ancestry format. But also create files from peer reviewed publications to compare with you loaded data to give your genetic disposition for the condition you have entered the data for an statistical risk if OR values are included. Included with the program are example files for Type 2 Diabetes risk factors. (As I have type 2 Diabetes so I could test the results).
SPAdes (St. Petersburg genome assembler) is an assembly toolkit containing various assembly pipelines and the de-facto standard for prokaryotic genome assemblies.
Descriptor library containing a variety of fingerprinting techniques, including the Smooth Overlap of Atomic Positions (SOAP).
A single molecule sequence assembler for genomes large and small.
A polymorphic bayesian genotyping model with wide applicability.
Collection of tools for working with BAM files.
A system for rapidly aligning entire genomes, whether in complete or draft form.
Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples.
Telseq is a tool for estimating telomere length from whole genome sequence data.