Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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10 of 5,923 resources
A haplotype-resolved assembler for accurate Hifi reads.
The modern C++ library for sequence analysis.
Structural variant discovery by integrated paired-end and split-read analysis.
SPAdes (St. Petersburg genome assembler) is an assembly toolkit containing various assembly pipelines and the de-facto standard for prokaryotic genome assemblies.
A single molecule sequence assembler for genomes large and small.
A polymorphic bayesian genotyping model with wide applicability.
Collection of tools for working with BAM files.
A system for rapidly aligning entire genomes, whether in complete or draft form.
Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples.
Telseq is a tool for estimating telomere length from whole genome sequence data.