Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

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🚀 Meerkat-8B is a new instruction-tuned medical AI system of the Meerkat model family. The model was based on the Meta's Llama-3-8B-Instruct model and fine-tuned using our new synthetic dataset consisting of high-quality chain-of-thought reasoning paths sourced from 18 medical textbooks, along…

Idle4261 year ago
Python

🚀 Meerkat-7B-v1.0 is an instruction-tuned medical AI system that surpasses the passing threshold of 60% for the United States Medical Licensing Examination (USMLE) for the first time among all 7B-parameter models. The model was trained using our new synthetic dataset consisting of high-quality…

Idle921 year ago
Python

This is https://huggingface.co/kingabzpro/Qwen-3-32B-Medical-Reasoning applied to https://huggingface.co/Qwen/Qwen3-32B Original model card created by @kingabzpro

Idle3421 year ago
Python

GP-MoLFormer is a class of models pretrained on SMILES string representations of 0.65-1.1B molecules from ZINC and PubChem. This repository is for the model pretrained on all the unique molecules from both datasets.

Idle1.5K1 year ago
Python

## Model Description EYE-Llama_gqa is a large language model specifically designed for ophthalmic question-answering (QA). It is built upon the Llama 2 architecture and fine-tuned on a the EYE-lit and EYE-QA+ dataset.

Idle1651 year ago
Python

This project fine-tunes the meta-llama/Llama-4-Scout-17B-16E-Instruct model using a medical reasoning dataset (FreedomIntelligence/medical-o1-reasoning-SFT) with 4-bit quantization for memory-efficient training.

Idle01 year ago
Python

Diabetica: Adapting Large Language Model to Enhance Multiple Medical Tasks in Diabetes Care and Management

Idle711 year ago
Python

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Idle1.9K1 year ago
Python

# MMedS-Llama3 💻Github Repo 🖨️arXiv Paper

Idle9481 year ago
Python

### Welcome to Nidum! At Nidum, we believe in pushing the boundaries of innovation by providing advanced and unrestricted AI models for every application. Dive into our world of possibilities and experience the freedom of Nidum-Llama-3.2-3B-Uncensored, tailored to meet diverse needs with…

Idle4.3K1 year ago
Python

We identified and fixed an issue related to a wrong permutation of some projections, which affects generation quality. To use the new model revision, please load as follows:

Idle2.8K1 year ago
Python

This model aims to be a base template for new models. It has been generated using this raw template.

Idle1291 year ago
Python

> [!IMPORTANT] > Better using New version of ChemLLM! > AI4Chem/ChemLLM-7B-Chat-1.5-DPO or AI4Chem/ChemLLM-7B-Chat-1.5-SFT

Idle1.1K1 year ago
Python

Chemma-2B is a continually pretrained gemma-2b model for organic molecules. It is pretrained on 40B tokens covering 110M+ molecules from PubChem as well as their chemical properties (molecular weight, synthetic accessibility score, drug-likeness etc.) and similarities (Tanimoto distance between…

Idle471 year ago
Python

The Mistral-DNA-v1-138M-bacteria Large Language Model (LLM) is a pretrained generative DNA text model with 17.31M parameters x 8 experts = 138.5M parameters. It is derived from Mistral-7B-v0.1 model, which was simplified for DNA: the number of layers and the hidden size were reduced.

Stale162 years ago
Python

Model Card for "medllama" ---------------------------

Stale152 years ago
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Stale7.9K2 years ago
Python

# Medical-Llama3-v2 Fine-Tuned Llama3 for Medical Q&A This repository provides a fine-tuned version of the powerful Llama3 8B model, specifically designed to answer medical questions in an informative way. It leverages the rich knowledge contained in the AI Medical Chatbot dataset…

Stale332 years ago
Python

This is an official model checkpoint for Asclepius-Mistral-7B-v0.3 (arxiv). This model is an enhanced version of Asclepius-7B, by replacing the base model with Mistral-7B-v0.3 and increasing the max sequence length to 8192.

Stale2462 years ago
Python

This is an official model checkpoint for Asclepius-Llama3-8B (arxiv). This model is an enhanced version of Asclepius-7B, by replacing the base model with Llama-3 and increasing the max sequence length to 8192.

Stale852 years ago
Python

# MMedLM 💻Github Repo 🖨️arXiv Paper

Stale3292 years ago
Python

# JSL-MedLlama-3-8B-v2.0

Stale5962 years ago
Python

Reference: R. Luu and M.J. Buehler, "BioinspiredLLM: Conversational Large Language Model for the Mechanics of Biological and Bio-Inspired Materials," Adv. Science, 2023, DOI: https://doi.org/10.1002/advs.202306724

Stale612 years ago
Python

Medical mT5: An Open-Source Multilingual Text-to-Text LLM for the Medical Domain

Stale382 years ago
Python

# ChemLLM-7B-Chat-1.5-DPO: LLM for Chemistry and Molecule Science ChemLLM-7B-Chat-1.5-DPO, The First Open-source Large Language Model for Chemistry and Molecule Science, Build based on InternLM-2 with ❤

Stale4182 years ago
Python

Using llama.cpp release b2440 for quantization.

Stale6152 years ago
Python

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Stale3752 years ago
Python

Using llama.cpp commit fa97464 for quantization.

Stale2782 years ago
Python

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Stale1152 years ago
Python

# Mr-Grammatology-clinical-problems-Mistral-7B-0.5 !image/png

Stale552 years ago
Python

Abstract:

Stale96K2 years ago
Python

This is a merge of pre-trained language models created using mergekit.

Stale7942 years ago
Python

Abstract:

Stale8752 years ago
Python

This is a merge of pre-trained language models created using mergekit.

Stale4212 years ago
Python

This is a merge of pre-trained language models created using mergekit.

Stale3K2 years ago
Python

SMILES2IUPAC-canonical-base was designed to accurately translate SMILES chemical names to IUPAC standards.

Stale5.1K2 years ago
Python

# TinyLlama-1.1B

Stale1192 years ago
Python

This is official model checkpoint for Asclepius-13B (arxiv). This model is the first publicly shareable clinical LLM, trained with synthetic data.

Stale582 years ago
Python
Stale1842 years ago
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Details coming soon

Stale2912 years ago
Python

# Meditron 70B - GGUF - Model creator: EPFL LLM Team - Original model: Meditron 70B

Stale7962 years ago
Python

MentaLLaMA-chat-7B is part of the MentaLLaMA project, the first open-source large language model (LLM) series for interpretable mental health analysis with instruction-following capability. This model is finetuned based on the Meta LLaMA2-chat-7B foundation model and the full IMHI instruction…

Stale4862 years ago
Python

This model is a fine-tuned model based on the Llama 2_7b architecture. It has been specifically trained on a dataset comprising USMLE (United States Medical Licensing Examination) questions and answers, as well as conversations between doctors and patients.

Stale1242 years ago
Python

Pre-trained language models have attracted increasing attention in the biomedical domain, inspired by their great success in the general natural language domain. Among the two main branches of pre-trained language models in the general language domain, i.e.

Stale3.1K3 years ago
Python

# ChemGPT 1.2B ChemGPT is based on the GPT-Neo model and was introduced in the paper Neural Scaling of Deep Chemical Models.

Stale3874 years ago
Python

# ChemGPT 19M ChemGPT is based on the GPT-Neo model and was introduced in the paper Neural Scaling of Deep Chemical Models.

Stale1.7K4 years ago
Python

# ChemGPT 4.7M ChemGPT is based on the GPT-Neo model and was introduced in the paper Neural Scaling of Deep Chemical Models.

Stale7204 years ago
Python