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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

6 of 5,923 resources

A list of pipeline resources.

Active6.6K1 month ago

Batteries included genomic analysis pipeline for variant and RNA-Seq analysis, structural variant calling, annotation, and prediction.

Idle1K1 year ago
Python
MIT

A flexible pipeline, built with Nextflow, for the complete analysis of bacterial genomes.

A generic but comprehensive bacterial annotation pipeline, built with Nextflow, with nice graphical options for investigating results.

Customizable pipeline for differential expression analysis with an intuitive GUI.

A pipeline for preprocessing short and long sequencing reads, built with Nextflow.