Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

12 of 5,923 resources

Utilities for working with CSV/Tab-delimited files.

Active6.4K3 weeks ago
Python
MIT

Another cross-platform, efficient, practical and pretty CSV/TSV toolkit.

Active1.2K1 month ago
Go
MIT

Sort genomic files according to a specified order.

Idle367 months ago
Go
MIT

Git repo of useful single line commands.

Stale2K2 years ago

Easily submitting PBS jobs with script template. Multiple input files supported.

Stale293 years ago
Python
MIT

Syntax Highlighting for Computational Biology file formats (SAM, VCF, GTF, FASTA, PDB, etc...) in vim/less/gedit/sublime.

Stale2723 years ago
Shell
GPL-3.0

Table file index.

Archived924 years ago
C

Modular and universal bioinformatics, Bionode provides pipeable UNIX command line tools and JavaScript APIs for bioinformatics analysis workflows.

A wee tool for random access into BGZF files.

Fast FASTQ filtering by matching reads against one or more regex patterns.

Write-once-read-many table for large datasets.

Create an index on a compressed text file.