trackastra
github.com/bioinfbrad/trackastra-galaxyTrackastra is a transformer-based cell-tracking tool for live-cell microscopy. It links already segmented cell instances across time by predicting associations between detections. It supports greedy tracking with or without cell divisions, optional ILP-based linking, pretrained tracking models, and export of tracked masks and lineage information in Cell Tracking Challenge format.
Sourced from
- bio.tools — trackastra-galaxy
- GitHub — github.com/bioinfbrad/trackastra-galaxy
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Conspecta is a browser-based research platform that brings microscopy image analysis, flow cytometry, molecular biology, sample tracking, and publication-ready figures into one connected workspace. It replaces the patchwork of disconnected tools most labs assemble, so a lab's data, samples, and results stay linked from experiment to figure with full traceability. Built for imaging-heavy and flow-heavy biology labs, new PIs, and early-stage biotech. Research-focused, not regulated or clinical. Free for you and one collaborator, every workspace included. Paid plans open it to the whole lab and add additional storage, AI object detection, external integrations via API, and bring-your-own AI assistant integration.