mutyper

Assigning and summarizing mutation types for analyzing germline mutation spectra. A Python package and command line utility for annotating the local ancestral sequence context of biallelic SNPs. See documentation for install and usage information. Ancestral \(k\)-mer Mutation Types for SNP Data — mutyper documentation. Pairs well with the package mushi, which performs mutation spectrum history inference. Ancestral k-mer mutation types for SNP data.