DOEJGI/GenomeOcean-4B-v1.2

GenomeOcean-500M-v1.2 is a 500-million-parameter causal language model for microbial genomic sequences. It is a continued-training checkpoint of GenomeOcean-500M (v1.0) trained on an expanded dataset that adds GTDB r226 representative genomes, INPHARED phage genomes, and the Zenodo RNA virus…

GenomeOcean-100M-v1.2 is a 100-million-parameter causal language model for microbial genomic sequences. It is a continued-training checkpoint of GenomeOcean-100M (v1.0) trained on an expanded dataset that adds GTDB r226 representative genomes, INPHARED phage genomes, and the Zenodo RNA virus…

This is the base model of GenomeOcean-4B. It is trained with Causal Language Modeling (CLM) and uses a BPE tokenizer with 4096 tokens. It supports a maximum sequence length of 10240 tokens (~50kbp).

A DNA annotation model from the Carbon family.

MIMIC is a multimodal encoder–decoder foundation model of the central dogma, trained jointly over DNA, RNA, and protein together with a range of structural and functional tracks. A single model embeds any subset of modalities into a shared representation space and generates any modality conditioned…