Biomni

github.com/snap-stanford/biomni
Active3.4Kupdated 1 month ago
Python
Apache-2.0

General-purpose biomedical AI agent integrating LLM reasoning with retrieval-augmented planning and code-based execution to autonomously execute diverse biomedical research tasks and generate testable hypotheses (Stanford SNAP, bioRxiv 2025)

Sourced from

  • Awesome AI for Sciencegithub.com/snap-stanford/biomni
  • GitHubgithub.com/snap-stanford/biomni

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