Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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2,558 of 7,078 resources
Showing 2,451–2,500
A centralized service for interoperable thesauri, ontologies and classification schemes for different subject areas based on SKOSMOS.
The GESIS Controlled Vocabulary (CV) browser provides thesauri, terminologies and classifications offered by GESIS for browsing and downloading.
The GESIS Knowledge Graph Ontology is used to build the GESIS Knowledge Graph (GESIS KG) which provides a FAIR-compliant semantic representation of scholarly metadata from the social sciences available in the GESIS Search.
The Thesaurus for the Social Sciences (TheSoz) contains about 12,000 entries, of which more than 8,000 are descriptors (authorized keywords) and about 6,000 non-descriptors. Topics from all disciplines of the social sciences are covered. This SKOS version of the thesaurus contains descriptors and non-descriptors in four languages (German, English, French, and Russian) as well as links to the TheSoz Classification, the STW Thesaurus for Economics, the AGROVOC Multilingual Thesaurus, and to DBpedia.
The internationalizatio (i18n) namespace is used for describing combinations of language tag and base direction in RDF literals. It is used as an alternative mechanism for describing the BCP47 language tag and base direction of RDF literals that would otherwise use the xsd:string or rdf:langString datatypes.
A timezone-aware extension of the iCal RDF vocabulary
In many areas of scholarly work, controlled vocabularies (gazetteers, thesauri, etc.) play a crucial role as a stable reference in the creation of resources as well as for ensuring interoperability between disparate projects and their data. The ILC4CLARIN vocabulary platform provides services and tools that allow for the collaborative maintenance and publication of vocabularies and taxonomies of any kind. The ILC4CLARIN vocabulary platform is based on the open-source Skosmos software which uses SKOS as its underlying data model. This software allows for the browsing of vocabularies with structured concept displays and the visualisation of concept hierarchies. Vocabularies can be queried via a search interface or by consulting an alphabetical or thematic index. With the ILC4CLARIN vocabulary platform they can also be accessed via a REST-API. This platform was conceived as a vocabulary hosting service for partners of the national CLARIN-IT consortium, H2IOSC project, and is intended to contribute to the future federation of vocabulary platforms within the SSH Open Cluster. [from about page]
Identifiers correspond to intron-encoded open reading frames (iORFs) for investigating translatable sORFs within introns.
Identifiers correspond to curated multi-omics datasets documenting post-transcriptional regulatory changes from RNA-binding protein perturbations in the KnockRBP database.
LINCS vocabularies support the linking of data related to cultural identities and activities, broadly defined, to complement other linked data vocabularies. They aim to support diversity, inclusivity, and context in the representation of human culture online.
A sub-registry of the Library of Congress Linked Data Service
A sub-registry of the Library of Congress Linked Data Service
The Thesaurus for Graphic Materials is a tool for indexing visual materials by subject and by genre/format. The thesaurus includes more than 7,000 subject terms and 650 genre/format terms to index types of photographs, prints, design drawings, ephemera, and other pictures. In 2007, the subject and genre/format vocabularies, previously maintained separately, were merged into a single list and migrated to new software, MultiTes. New terms are added regularly. TGM is searchable through the Prints and Photographs Online Catalog (PPOC). For questions about the thesaurus, contact TGM editors at: tgmed@loc.gov. (from homepage)
A sub-registry of the Library of Congress Linked Data Service
A sub-registry of the Library of Congress Linked Data Service
The Library of Congress Linked Data Service (id.loc.gov) provides interactive and machine access to the Library's authority and bibliographic metadata, along with commonly-found standards and vocabularies used and/or maintained by the Library of Congress. Each controlled vocabulary list has a resolvable URI, as does each data value within it. Ontologies for several major data element sets are also available. This includes the LCSH (Library of Congress Subject Headings), the TGM (Thesaurus for Graphic Materials), preservation vocabularies, language and country codes, or the American Folklore Society Ethnographic Thesaurus (AFS Ethnographic Thesaurus) among others.
Loterre (Linked open terminology resources) is a platform for multidisciplinary terminological scientific resources sharing, complying with the linked open data standards and the FAIR principles.
A vocabulary in LOV gathers definitions of a set of classes and properties (together simply called terms of the vocabulary), useful to describe specific types of things, or things in a given domain or industry, or things at large but for a specific usage. Terms of vocabularies also provide the links in linked data, in the above case between a Person and a City. The definitions of terms provided by the vocabularies bring clear semantics to descriptions and links, thanks to the formal language they use (some dialect of RDF such as RDFS or OWL). In short, vocabularies provide the semantic glue enabling Data to become meaningful Data. [from https://lov.linkeddata.es/dataset/lov/about]
Identifiers correspond to literature references for molecular glue studies in the MGTbind database.
Identifiers correspond to ternary complex interactions involving molecular glues with bioactivity measurements in the MGTbind database.
Identifiers correspond to curated molecular glue compounds with chemical structures and physicochemical properties in the MGTbind database.
MoonProt provides identifiers for manually curated moonlighting proteins, which are proteins that perform two or more distinct, unrelated physiological functions using a single polypeptide chain.
A registry of metadata crosswalks
Nbvok is the vocabulary service provided by the National Library of Norway, containing controlled vocabularies represented as open linked data according to the SKOS-ontology. Our vocabularies are published using the Skosmos application. SKOSMOS is developed by the National Library of Finland and designed particularly with user-friendly navigation in structured vocabularies in mind. [from about page]
The Ontology Lookup Service (OLS) is a repository for biomedical ontologies that aims to provide a single point of access to the latest ontology versions.
A mid-level ontology describing devices, services, and networking that extends SAREF
Ontobee is aimed to facilitate ontology data sharing, visualization, query, integration, and analysis.
A vocabulary of licenses produced by the Open Source Initiative (OSI)
The legacy namespace for representing OWL in XML