Find open-source science resources

function of one or more proteins in microbes and plants.

between proteins and complexes, along with their type and provenance

proteins (SBP), describing the specific molecules or complexes that SBPs

protein-target complexes, detailing their components, 3D structures and docking

protein scaffolds of synthetic binding proteins (SBP), detailing their structural

proteins, providing detailed information on their sequences, structures, targets, and functional

UniProtKB proteins. This replaces the previous rule-based SAAS system.

proteins are involved are described in UniProtKB entries with a controlled

protein is found are described in UniProtKB entries with a controlled

protein sequence and functional information with extensive cross-references to more

proteome sets of proteins whose genomes have been completely sequenced.

protein properties such as the protein name, function, catalytic activity

protein-protein complex. Transient protein-protein complexes are stable in the complexed

protein-ligand docking by automatic preprocessing protocols for the protein

protein. Global properties, describing the size, shape, and chemical features

protein-ligand complexes, focusing on the interactions between protein and ligand

protein nanopores, which serve as essential molecular gateways in biological

protein structures against the AlphaFold DB (https://alphafold.ebi.ac.uk/) and TED DB (https://ted.cathdb.info

protein-ligand complexes, focusing on the interactions between protein and ligand

protein-protein or protein-ligand interfaces. Several filter options to simplify

binding sites at protein domain interfaces or within multimeric proteins.

protein-ligand binding sites. Based on individually designed queries, users

protein structures. WarPP was validated on a high-quality set of 1,500 protein

protein-ligand complexes. It adds missing hydrogen atoms to protein

protein structures play a vital role in drug design. Structure

filtering of digested protein datasets to accelerate experimental spectra cross-referencing.

protein binders, achieving strong binding across diverse target classes including

protein levels that are independent of total mRNA levels (i.e. changes

bipartite graph of protein complex membership using AP-MS data.

protein (RBP) is key to understand (post-) transcriptional regulatory processes

protein’s simultaneous impact into multiple complexes based on network

protein-protein interaction networks and the detection of functional modules

Protein Phosphorylation, Copy Number Alteration) hosted by the Computational Biology

protein binding sites from ChIP-seq and nucleosome positioning experiments

protein expression analysis, ADT evaluation, ligand-receptor interaction analysis, and interactive

interactions of proteins to guide and validate the integration of links.

protein pools in the samples and thus improve protein identification

protein expression data. DecontX is a novel Bayesian method to computationally

protein-protein interaction (PPI), chemical-chemical interaction (CCI), or single

proteins whose interactions in the network is dysregulated by the compound

proteins (Y), to infer a matrix of molecular protein dependencies

protein abundance estimates varies by the number of peptides/PSMs quantified

protein domains or metabolomics profiling, are propagated to their neighbours

proteins. These are individual amino acids that accumulate mutations at a much

protein interaction profiles of small molecules from whole cell or tissue

protein-coding genes, distal enhancers, and genes encoding microRNAs and lncRNAs

proteins using BD Accuri C6 and SORP cytometers. However, the functions

protein engineering is key to solving fundamental problems in synthetic