Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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118 of 5,893 resources
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Gemina (Genomic Metadata for Infections Agents) is a web interface and database for storing genomic sequence of pathogens and epidemiological information for the infectious diseases they cause.
The Genome Aggregation Database (gnomAD) is a resource developed by an international coalition of investigators, with the goal of aggregating and harmonizing both exome and genome sequencing data from a wide variety of large-scale sequencing projects, and making summary data available for the wider scientific community (from https://gnomad.broadinstitute.org).
The WikiPatwhays Graphical Pathway Markup Language (GPML) vocabulary.
The hu.MAP integrates several large scale protein interaction datasets to obtain a comprehensive view of protein complexes.
Shorthand representations of languages and their subtypes
Integbio Database Catalog provides whereabouts information (URL), database description, biological species and other attributes (metadata) of Japanese and international life science databases to make it easier for users to find databases they need. This catalog has been developed as a part of the integration of life science databases promoted by four ministries in Japan: the Ministry of Education, Culture, Sports, Science, and Technology (MEXT), The Ministry of Health, Labor, and Welfare (MHLW), the Ministry of Agriculture, Forestry, and Fisheries (MAFF), and the Ministry of Economy, Trade, and Industry of Japan (METI). (from https://integbio.jp/dbcatalog/en/about)
Information system with taxonomic data on plants, animals, fungi, and microbes of North America and the world.
A cross-sectoral metadata profile for describing teaching and learning resources, primarily based on [schema.org](https://schema.org) and the Learning Resource Metadata Initiative LRMI, and additionally utilizing elements of the Simple Knowledge Organization System SKOS. A JSON-LD11-compliant data structure is defined in the form of this HTML specification, including a JSON schema against which data can be automatically checked for conformity with the profile.
Identifiers describing conditions of access to an object (login) as defined by the [OER metadata group](https://oerworldmap.org/resource/urn:uuid:fd06253e-fe67-4910-b923-51db9d27e59f).
Library of Congress Subject Headings (LCSH) has been actively maintained since 1898 to catalog materials held at the Library of Congress. (from homepage)
Under this name space new properties and classes needed for the service lobid ('linking open bibliographic data') are defined . Already existing properties and classes which are (re)used in lobid aren't documented here [from TTL]
A mid-level ontology for representing metadata related to NFDI resources, including individuals, organizations, projects, data portals, and more
The NFDI4Culture Ontology (CTO) is a domain-specific ontology module developed within the Task Area 5 of the NFDI4Culture initiative. (from homepage)