Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

25 of 6,590 resources

Open-source construction ERP with AI-powered cost matching, BOQ generation, and PDF/CAD/BIM takeoff; 42 regional catalogues, 21 languages, 71 modules (DataDrivenConstruction, 717+ stars, AGPL-3.0, 2026)

Active71710 hours ago
TypeScript
AGPL-3.0

Open-source AI workbench for scientific research that automates the full research loop β€” literature review, hypothesis generation, code writing, experiment execution, database querying, and report writing β€” with 290+ skills, specialized research agents, and a browser-based workspace (1453+ stars, Apache 2.0, 2026)

Active3.3K3 days ago
TypeScript
Apache-2.0

PureJsImage is a free, open-source TypeScript library for decoding, inspecting, processing, and converting ordinary images and scientific rasters in Node.js and modern browsers. It provides explicit readers for microscopy, whole-slide pathology, medical imaging, electron microscopy, spectroscopy, hyperspectral, and multidimensional array formats. These include OME-TIFF, OME-Zarr, Aperio SVS, DICOM, NIfTI, MRC/CCP4, NRRD, DigitalMicrograph, EMD, ENVI, and FITS. Range-backed readers can request selected regions, tiles, volume planes, and metadata while preserving native numeric samples where supported. The default package has no runtime dependencies. Optional JPEG and PNG WebAssembly accelerators require explicit registration.

Active833 days ago
TypeScript
MIT

Local-first, open-source AI workbench for scientists β€” an open alternative to Claude Science (by ai4s-research, maintainers of this list; TypeScript, MIT, 2026)

Active1.4K6 days ago
TypeScript
NOASSERTION

Multi-type data labeling and annotation tool

Active28.1K1 week ago
TypeScript
Apache-2.0

Satellite-powered agricultural and land analytics platform combining Sentinel-2 imagery, Google Earth Engine processing, real-time weather data, soil science databases, and AI-driven crop planning into a unified web dashboard (145+ stars, AGPL-3.0, 2026)

Active1452 weeks ago
TypeScript
AGPL-3.0

Open-source 3D architectural editor with an AI design assistant; build floor plans with walls, doors, windows, and furniture using natural language, with real-time WebGPU-powered previews (TangSY, 59+ stars, MIT License, 2026)

Active592 weeks ago
TypeScript
MIT

A large RDF store built from American governmental data. This semantic space has a mixture of direct terms and subspaces.

Active312 weeks ago
TypeScript
Apache-2.0

Research agent system deeply integrated with Zotero supporting Agent Mode, skills, multi-model backends (OpenAI-compatible, Claude Code, WebChat, Codex), and MinerU PDF parsing for literature Q&A, summarization, figure inspection, and source comparison (1.3K+ stars, 2026)

Active2.6K2 weeks ago
TypeScript
AGPL-3.0

A RDF vocabulary for OER content on the web.

Active223 weeks ago
TypeScript
MIT

Open-source, local-first, model-agnostic AI research workbench for reproducible scientific discovery; runs Python/R notebooks, searches the web, calls scientific data connectors, and produces inspectable reports, tables, and figures in a self-hosted desktop workspace (1.5K+ stars, Apache 2.0, 2026)

Active1.5K3 weeks ago
TypeScript
Apache-2.0

Curated, accuracy-first collection of benchmarks for evaluating LLMs on scientific reasoning and discovery across mathematics, physics, chemistry, materials science, biology, and agentic science (subinium, 29+ stars, MIT License, 2026)

Active293 weeks ago
TypeScript
MIT

Offline-first scientific writing workspace powered by Claude, integrating LaTeX, Python, and 100+ scientific skills with local execution, Zotero integration, and privacy-focused design (2026)

Active1.8K1 month ago
TypeScript
MIT

AI-driven desktop workbench for computational materials science with an interactive 3D structure editor, natural-language CatBot assistant, visual DAG workflow engine, remote-cluster access, and HPC job submission for VASP, ORCA, CP2K, Quantum ESPRESSO, GPAW, DFTB+, SIESTA, and LAMMPS (172+ stars, AGPL-3.0, 2026)

Active1731 month ago
TypeScript
AGPL-3.0

Auto-generates clean, customizable academic CVs from open research data (OpenAlex, ORCID, Crossref, DataCite, Open Editors Plus). A single canonical CV object drives every output format (HTML, PDF, DOCX, LaTeX, Markdown); citations render through CSL; and the account holder is matched by persistent identifier (ORCID / OpenAlex ID) rather than name string. Free for individuals, open-source, and FAIR by design.

Active21 month ago
TypeScript
Apache-2.0

An interactive structure/property explorer for materials and molecules.

Active1821 month ago
TypeScript
BSD-3-Clause

Visualization intermediate language that lets AI agents create expressive, polished charts from simple, human-editable specs, compiling the same input to 30+ chart types across Vega-Lite, ECharts, and Chart.js with an MCP server for agent integration (1.9K+ stars, MIT License, 2026)

Active2K1 month ago
TypeScript
MIT

Free, open-source desktop AI research assistant that runs locally and turns natural-language requests into real data analysis, literature search, figure generation, and manuscript review; ships with 149 scientific skills, 326 workflow templates, and 229 databases across genomics, proteomics, drug discovery, and materials science, plus a living lab notebook, 60+ scientific file previews, and LaTeX editing (K-Dense-AI, 908+ stars, MIT License, 2026)

Active9081 month ago
TypeScript
MIT

First system progressively surpassing human SOTA on frontier AI tasks (183.7%, 1.9%, 7.9% improvements), month-long autonomous discovery with 20,000+ GPU hours

Active3.3K1 month ago
TypeScript
Apache-2.0

Self-evolving AI research colleague built on OpenClaw with 285+ runtime-adaptive skills across 28+ disciplines, persistent cross-session research memory, and zero-hallucination citation protocols; agent autonomously writes new SKILL.md files based on research patterns without redeployment (828+ stars, MIT License, 2026)

Active8852 months ago
TypeScript
MIT

Standalone browser-based Gene Ontology network viewer for exploring, filtering, searching, and exporting GO term and gene annotation neighborhoods from locally preprocessed GO OBO and GAF data.

Active03 months ago
TypeScript
MIT

2D interactive visualization in Jupyter.

Active3.7K3 months ago
TypeScript
Apache-2.0

Classic open-source plugin for document Q&A and summarization within Zotero

Active7.3K3 months ago
TypeScript
AGPL-3.0

Web application for LLM-assisted manuscript review and annotation

Stale12 years ago
TypeScript
MIT

Point and click, cross platform suite for analysing and visualizing next-generation sequencing datasets.

Stale173 years ago
TypeScript
GPL-3.0