Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

3 of 7,055 resources

jaxQTL is a flexible and efficient sc-eQTL mapping framework using count-based models, designed to analyze sparse counts in scRNA-seq data and large datasets. It has been shown to identify more eGenes compared with existing approaches, improving our ability to identify distal eQTLs.

Active201 month ago
Shell
MIT

Plasmid Copy Number Estimator is a tool to estimate the copy numbers of plasmids detected in an assembled genome

Active72 months ago
Shell
MIT

Simple test framework for Nextflow pipelines