Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

374 of 6,569 resources

Showing 151200

Active245.4K4 months ago
Python

Fine-tuned version of google/gemma-4-E4B-it across three professional domains — Medical, Legal, and Finance — using QLoRA (4-bit NF4) with Optuna-tuned hyperparameters, trained on Kaggle T4 GPU.

Active1K4 months ago
Python

L1 (Learning Unit 1) is the first language model from Lunit and Lunit Consortium, purpose-built for the medical domain. Derived from Gravity-16B-A3B-Base, L1 is designed for clinical reasoning and decision support.

Active844 months ago
Python

## Model Description This is a lightweight, high-performance image classification model built to diagnose histopathological scans of lung and colon tissues. This model was specifically designed for rapid web deployment without sacrificing clinical accuracy.

Active44 months ago
Python

MarkushGrapher-2 is an end-to-end multimodal model for recognizing chemical structures from patent document images. It jointly encodes vision, text, and layout information to convert Markush structure images into machine-readable CXSMILES representations.

Active1735 months ago
Python

# or·a·cle /ˈôrəkəl/ — a source of wise counsel; one who provides authoritative knowledge. From Latin ōrāculum, meaning divine announcement. In computer science, an oracle is a black box that always returns the correct answer — you don't ask it how it knows, you ask and it answers.

Active1425 months ago
Python

ChemicalOCR is a compact vision-language model fine-tuned specifically for optical character recognition (OCR) in chemical structure images. It extracts text and bounding boxes from molecular drawings, enabling the recognition of atom labels, abbreviations, and descriptive text within chemical…

Active4715 months ago
Python

# GigaHeart ## A Cardiac-specific CT Foundation Model for Heart Transplantation

Active75 months ago
Python

![Language: Multilingual]()

Active2785 months ago
Python

RNAElectra is a nucleotide-resolution RNA language model trained using an ELECTRA-style objective for efficient and discriminative representation learning. The model produces contextualized embeddings for RNA sequences and is designed for downstream transcriptomic and regulatory modeling tasks.

Active23K5 months ago
Python

Vortex Scientific is a from-scratch AI model family designed for deep scientific reasoning. Built from the ground up with a novel hybrid state-space + attention architecture, optimized for consumer laptop hardware (Apple Silicon MacBooks and Nvidia 4060 laptop GPUs).

Active05 months ago
Python

In search enginers, rerankers are crucial for improving the accuracy of your retrieval system.

Active22.9K5 months ago
Python

This repository contains the model presented in D3LM: A Discrete DNA Diffusion Language Model for Bidirectional DNA Understanding and Generation.

Active325 months ago
Python

For a convenient overview and download list, visit our model page for this model.

Active615 months ago
Python

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Active85 months ago
Python

![Language: Multilingual]()

Active1.4K5 months ago
Python

Sahal Shaji Mullappilly\, Mohammed Irfan K\, Omair Mohamed, Mohamed Zidan, Fahad Khan, Salman Khan, Rao Muhammad Anwer, and Hisham Cholakkal

Active3725 months ago
Python

A compact protein language model distilled from ProtGPT2 using complementary-regularizer distillation---a method that combines uncertainty-aware position weighting with calibration-aware label smoothing to achieve 31% better perplexity than standard knowledge distillation at 3.8x compression.

Active706 months ago
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A compact protein language model distilled from ProtGPT2 using complementary-regularizer distillation---a method that combines uncertainty-aware position weighting with calibration-aware label smoothing to achieve 54% better perplexity than standard knowledge distillation at 9.4x compression.

Active56 months ago
Python

A compact protein language model distilled from ProtGPT2 using complementary-regularizer distillation---a method that combines uncertainty-aware position weighting with calibration-aware label smoothing to achieve 87% better perplexity than standard knowledge distillation at 20x compression.

Active146 months ago
Python
Idle7.1K6 months ago
Python
Idle3146 months ago
Python
Idle10.8K6 months ago
Python
Idle6.5K6 months ago
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Idle18K6 months ago
Python

🌟 Github | 📥 Model Download | 📚 Dataset | 📄 Paper Link | 🌐 Project Page

Idle426 months ago
Python

From Inquiry to Decision: Building Trustworthy Medical AI

Idle206 months ago
Python

A Neural Machine Translation (NMT) model based on a custom Transformer (Encoder-Decoder) architecture, trained from scratch. This model is designed to translate English sentences into Hebrew using multilingual encoding and specialized layer configurations.

Idle116 months ago
Python

WiNGPT 是一个基于GPT的医疗垂直领域大模型,旨在将专业的医学知识、医疗信息、数据融会贯通,为医疗行业提供智能化的医疗问答、诊断支持和医学知识等信息服务,提高诊疗效率和医疗服务质量。

Idle8.1K7 months ago
Python

Matěj Pekár, Vít Musil, Rudolf Nenutil, Petr Holub, Tomáš Brázdil

Idle3167 months ago
Python

AVAILABLE NOW THE LATEST ITERATION OF THE ALOE FAMILY! ALOE BETA 8B AND ALOE BETA 70B VERSIONS. These include: Better overall performance More thorough alignment and safety * License compatible with more uses

Idle4997 months ago
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Aloe: A Family of Fine-tuned Open Healthcare LLMs

Idle1.3K7 months ago
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Unsloth Dynamic 2.0 achieves superior accuracy & outperforms other leading quants.

Idle9.2K7 months ago
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PII Detection Model | 44M Parameters | Open Source

Idle27K7 months ago
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PII Detection Model | 434M Parameters | Open Source

Idle105.4K7 months ago
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This is a MobileViT (Small) model fine-tuned on the Processed Diabetic Retinopathy dataset.

Idle47 months ago
Python

> [!NOTE] > Inspired by the thought of: what if you could speak to an offline medical assistant that doesn't decline to answer some of your questions?

Idle267 months ago
Python

The MediPhi Model Collection comprises 7 small language models of 3.8B parameters from the base model Phi-3.5-mini-instruct specialized in the medical and clinical domains. The collection is designed in a modular fashion. Five MediPhi experts are fine-tuned on various medical corpora (i.e.

Idle3258 months ago
Python

The MediPhi Model Collection comprises 7 small language models of 3.8B parameters from the base model Phi-3.5-mini-instruct specialized in the medical and clinical domains. The collection is designed in a modular fashion. Five MediPhi experts are fine-tuned on various medical corpora (i.e.

Idle7948 months ago
Python

The MediPhi Model Collection comprises 7 small language models of 3.8B parameters from the base model Phi-3.5-mini-instruct specialized in the medical and clinical domains. The collection is designed in a modular fashion. Five MediPhi experts are fine-tuned on various medical corpora (i.e.

Idle1328 months ago
Python

The MediPhi Model Collection comprises 7 small language models of 3.8B parameters from the base model Phi-3.5-mini-instruct specialized in the medical and clinical domains. The collection is designed in a modular fashion. Five MediPhi experts are fine-tuned on various medical corpora (i.e.

Idle1K8 months ago
Python

The MediPhi Model Collection comprises 7 small language models of 3.8B parameters from the base model Phi-3.5-mini-instruct specialized in the medical and clinical domains. The collection is designed in a modular fashion. Five MediPhi experts are fine-tuned on various medical corpora (i.e.

Idle2K8 months ago
Python

## Description: Geneformer is a foundational transformer model pretrained on a large-scale corpus of single-cell transcriptomes to enable context-specific predictions in settings with limited data in network biology.

Idle1818 months ago
Python

## Description: Geneformer is a foundational transformer model pretrained on a large-scale corpus of single-cell transcriptomes to enable context-specific predictions in settings with limited data in network biology. This model version was continually pretrained on ~14 million cancer transcriptomes…

Idle168 months ago
Python

## Description: Geneformer is a foundational transformer model pretrained on a large-scale corpus of single-cell transcriptomes to enable context-specific predictions in settings with limited data in network biology.

Idle318 months ago
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## Description: Geneformer is a foundational transformer model pretrained on a large-scale corpus of single-cell transcriptomes to enable context-specific predictions in settings with limited data in network biology.

Idle178 months ago
Python

For a convenient overview and download list, visit our model page for this model.

Idle1668 months ago
Python