Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

22 of 6,573 resources

A 350M encoder that finds nine types of personally identifiable information across 17 languages and returns exact character spans for review and redaction.

Active8341 week ago
Python

Healthcare Brain Procedure Surgery NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of surgical procedures, diagnostic tests, interventions, and procedural details from unstructured clinical text.

Active241 month ago
Python

Healthcare Brain Vitals NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of vital signs, body measurements, and physiological parameters from clinical text.

Active241 month ago
Python

Healthcare Brain Laboratory NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of laboratory test results, values, units, reference ranges, and abnormality flags from unstructured clinical text.

Active271 month ago
Python

Healthcare Brain Diagnosis ICD NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of diagnoses, conditions, and support for ICD-10/SNOMED code mapping from unstructured clinical text.

Active381 month ago
Python

Healthcare Brain Medication NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of medication names, dosages, routes, frequencies, and administration details from unstructured clinical text.

Active541 month ago
Python

Healthcare Brain Clinical Findings NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of clinical findings, diseases, conditions, anatomical locations, and clinical modifiers from unstructured clinical text.

Active01 month ago
Python

Healthcare Brain NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated detection and de-identification of Protected Health Information (PHI) and Personally Identifiable Information (PII) in unstructured clinical text.

Active311 month ago
Python

CliniGuard Laboratory NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of laboratory test results, values, units, reference ranges, and abnormality flags from unstructured clinical text.

Active01 month ago
Python

CliniGuard Diagnosis ICD NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of diagnoses, conditions, and support for ICD-10/SNOMED code mapping from unstructured clinical text.

Active171 month ago
Python

CliniGuard Medication NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of medication names, dosages, routes, frequencies, and administration details from unstructured clinical text.

Active171 month ago
Python

CliniGuard Clinical Findings NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of clinical findings, diseases, conditions, anatomical locations, and clinical modifiers from unstructured clinical text.

Active01 month ago
Python

CliniGuard Vitals NER is a transformer-based clinical Named Entity Recognition model developed by Genzeon Platforms for automated extraction of vital signs, body measurements, and physiological parameters from clinical text.

Active72 months ago
Python

CliniGuard NER is a clinical Named Entity Recognition model developed by Genzeon Platforms for automated detection and de-identification of Protected Health Information (PHI) and Personally Identifiable Information (PII) in clinical text.

Active32 months ago
Python

PII Detection Model | 44M Parameters | Open Source

Idle27K7 months ago
Python

PII Detection Model | 434M Parameters | Open Source

Idle105.4K7 months ago
Python

Specialized model for Chemical Entity Recognition - Identifies chemical compounds and substances in biomedical literature

Idle711 year ago
Python

Specialized model for Chemical Entity Recognition - Identifies chemical compounds and substances in biomedical literature

Idle104.1K1 year ago
Python

Specialized model for Chemical Entity Recognition - Chemical entities from the BC5CDR dataset

Idle258K1 year ago
Python

This model is a fine-tuned version of DeBERTa on the PubMED Dataset.

Stale32.6K2 years ago
Python

This model may be overfit to some extent (see below). Try running this notebook on the datasets linked to in the notebook. See if you can figure out why the metrics differ so much on the datasets. Is it due to something like sequence similarity in the train/test split?

Stale312 years ago
Python

项目地址:https://github.com/iioSnail/chinesemedicalner

Stale983 years ago
Python