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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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17 of 7,767 resources matching “protein”
drzo/ESMC-6B
by drzoprotein language model that has learned the rules of protein
state-of-the-art protein language model trained on billions of protein sequences…
state-of-the-art protein language model trained on billions of protein sequences…
state-of-the-art protein language model trained on billions of protein sequences…
biohub/ESMC-6B
by biohubprotein language model that has learned the rules of protein
biohub/ESMC-600M
by biohubprotein language model that has learned the rules of protein
biohub/ESMC-300M
by biohubprotein language model that has learned the rules of protein
ctheodoris/Geneformer
by ctheodoris# Geneformer Geneformer is a foundational transformer model pretrained on a
SII-GAIR-NLP/RIBOSPAN-FM
by SII-GAIR-NLPMany full-length RNAs, particularly mRNAs, exceed the ~1K context
macwiatrak/bacformer-large-masked-MAG
by macwiatrak- 2025-05-15: We identified a bug in the Bacformer
- 2025-05-15: We identified a bug in the Bacformer
jheuschkel/SynCodonLM-V2
by jheuschkel- This repository contains code to utilize the model, and reproduce
scikit-bio/TMVec-2
by scikit-bioTM-Vec 2: Transformer-based architecture for remote homology detection
This model is a lightweight model pre-trained on SELFIES
nvidia/AMPLIFY_350M
by nvidia> [!NOTE] > This model has been optimized using NVIDIA
nvidia/AMPLIFY_120M
by nvidia> [!NOTE] > This model has been optimized using NVIDIA
AmelieSchreiber/esm_interact
by AmelieSchreiberproteins in much the same way as PepMLM. It is meant