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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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An optimized FM-index library for nucleotide and amino acid search. A fast, AVX2 accelerated FM-index library that utilizes windows of SIMD registers to quickly locate exact match kmers in genetic data. This FM-index is highly optimized for both nucleotide and amino sequences, but is unsuitable for general text.
BioMetAll is a command line application to allow the identification of metal-binding sites in proteins from backbone preorganization.