Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

22 of 6,750 resources

A Simulation Tool for Fractured and Deformable Porous Media.

Active3184 days ago
Python
GPL-3.0

atomate2 is a library of computational materials science workflows.

Active3451 week ago
Python
NOASSERTION

A library containing basis sets for use in quantum chemistry calculations. In addition, this library has functionality for manipulation of basis set data.

Active2012 weeks ago
Python
BSD-3-Clause

A library and command-line tool for building and analyzing complex homogeneous microkinetic models from quantum chemistry calculations, with support for quasi-harmonic thermochemistry, quantum tunnelling corrections, molecular symmetries and more.

Active643 weeks ago
Python
MIT

A quantum chemistry package written in Python.

Active793 weeks ago
Python
Apache-2.0

Python Library for Automating Molecular Simulation: input preparation, job execution, file management, output processing and building data workflows.

Active931 month ago
Python
NOASSERTION

Open source PEM (Proton Exchange Membrane) fuel cell simulation tool.

Active2311 month ago
Python
MIT

Interaction Fingerprints for protein-ligand complexes and more.

Active5341 month ago
Python
Apache-2.0

A package to 'build' collections of materials properties from the output of computational materials calculations.

Active681 month ago
Python
NOASSERTION

Parameter/topology editor and molecular simulator with visualization capability.

Active4532 months ago
Python

A tool and library for creating quantum chemistry input files.

Active523 months ago
Python
BSD-3-Clause

Makes alchemical free energy calculations easier by leveraging the full power and flexibility of the PyData stack.

Active2413 months ago
Python
BSD-3-Clause

The "FRamewOrk for Molecular AGgregate Excitations" enables localised QM/QM' excited state calculations in a solid state environment.

Active324 months ago
Python
MIT

File parser/converter for QM, MD and plane-wave DFT programs.

Idle1707 months ago
Python
LGPL-3.0

A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.

Idle3358 months ago
Python
MIT

A library for computational chemistry (DFT) for input file generation, data extraction, method screening and analysis.

Idle2210 months ago
Python
Apache-2.0

A library for estimating thermochemical properties of molecules and adsorbates using group additivity.

Idle91 year ago
Python
MIT

General purpose tools for high-throughput catalysis.

Idle1051 year ago
Python
GPL-3.0

A module for solving and visualizing the Schrödinger equation.

Idle1.2K1 year ago
Python
BSD-3-Clause

Usage-Instructions) - A program to visualize reaction networks.

Stale262 years ago
Python
LGPL-3.0

An open, extensible Python framework for GPU-accelerated alchemical free energy calculations.

Stale2033 years ago
Python
MIT

Open Drug Discovery Toolkit, a modular and comprehensive toolkit for use in cheminformatics, molecular modeling etc.

Stale4703 years ago
Python
BSD-3-Clause