Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

7 of 6,569 resources

An ultrafast protein aligner for `blastp` and `blastx` like searches.

Active1.3K2 weeks ago
C++
GPL-3.0

the wavefront alignment algorithm (WFA) which expoit sequence similarity to speed up alignment

Active2241 month ago
C
NOASSERTION

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences.

Active1.8K2 months ago
C
GPL-3.0

An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences.

Active8052 months ago
C++
GPL-3.0

BWA-MEM drop-in replacement: 2-3x faster, 2-5x cheaper, 100% identical output on standard CPUs.

Idle266 months ago
C
MIT

SIMD C library for global, semi-global, and local pairwise sequence alignments

Idle28512 months ago
C
NOASSERTION

A system for rapidly aligning entire genomes, whether in complete or draft form.

Idle5681 year ago
C++
Artistic-2.0