Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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4 of 7,742 resources
A Python package that allows mapping various types of biological data layers (points, heatmaps, lines) directly onto the interactive taxonomic tree provided by Lifemap.
GENIA is a genome-informed, machine learning-guided framework for rationally designing synthetic microbial communities (SynComs) capable of simultaneously degrading multiple persistent environmental pollutants, such as PFAS and atrazine.
denim is a pipeline for targeted assembly of internal transcribed spacer (ITS) sequences from genomic and metagenomic sequencing data. It detects 'invisible' microbial lineages, such as those in the genus *Phytophthora*, providing insights into microbial eukaryotic diversity and pathogen detection.
MitoNGS is a web-based platform designed for high-resolution analysis of fish metabarcoding data, succeeding the MiFish pipeline. It improves biodiversity assessment by incorporating comprehensive references and a 'species complex' strategy to resolve ambiguous taxa.