yu-lab-proteomics/soma-olink-crosswalk-models

A lightweight plasma-protein aging clock that predicts chronological age from 85 unique inflammatory proteins measured by SomaScan (125 aptamers / SomaScan features). The model is a TabM† student distilled from a TabPFN v2 teacher, so it runs at inference without any TabPFN dependency (small,…

33 lightweight, standalone models that predict discrete Alzheimer's-disease–related phenotypes (e.g. medication use, APOE genotype, vascular pathology, sex) from SomaScan plasma proteomics. The full list is in phenotypes.tsv.

69 lightweight, standalone models that predict continuous Alzheimer's-disease–related phenotypes (cognition, neuropathology burden, motor/functional measures, demographics, a genetic risk score, and longitudinal change) from SomaScan plasma proteomics.

PPTStab: Prediction and Designing of thermostable proteins with a desired melting temperature

A lightweight plasma-protein aging clock that predicts chronological age from 92 Olink Inflammation-panel proteins. The model is a TabM† student distilled from a TabPFN v2 teacher, so it runs at inference without any TabPFN dependency (small, DUA-friendly artifacts).

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang.