XTRACT

github.com/spmic-uon/xtract_atlases

Standardised protocols for automated tractography and connectivity blueprints in the human and macaque brain. WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque brain. Reference: Warrington S, Bryant KL, Khrapitchev AA, Sallet J, Charquero-Ballester M, Douaud G, Jbabdi S, Mars RB*, Sotiropoulos SN* (in prep.) XTRACT - Standardised protocols for automated tractography and connectivity blueprints in the human and macaque brain. XTRACT - a command-line tool for automated tractography. XTRACT can be used to automatically extract a set of carefully dissected tracts in humans and macaques (other species to come). It can also be used to define one's own tractography protocols where all the user needs to do is to define a set of masks in standard space (e.g. MNI152)

Sourced from