tahoebio/Tahoe-100M-SCVI-v1

https://huggingface.co/tahoebio/Tahoe-100M-SCVI-v1
Idleby tahoebio021updated 1 year ago

An SCVI model and minified AnnData of the Tahoe-100M dataset from Vevo Tx.

Sourced from

  • HuggingFacetahoebio/Tahoe-100M-SCVI-v1

Related resources

CondSCVI is a variational inference model for single-cell RNA-seq data that can learn an underlying latent space. The predictions of the model are meant to be afterward used for deconvolution of a second spatial transcriptomics dataset in DestVI.

Active05 months ago

CondSCVI is a variational inference model for single-cell RNA-seq data that can learn an underlying latent space. The predictions of the model are meant to be afterward used for deconvolution of a second spatial transcriptomics dataset in DestVI.

Active05 months ago

CondSCVI is a variational inference model for single-cell RNA-seq data that can learn an underlying latent space. The predictions of the model are meant to be afterward used for deconvolution of a second spatial transcriptomics dataset in DestVI.

Active05 months ago

Stereoscope is a variational inference model for single-cell RNA-seq data that can learn a cell-type specific rate of gene expression. The predictions of the model are meant to be afterward used for deconvolution of a second spatial transcriptomics dataset in Stereoscope.

Active05 months ago

ScVI is a variational inference model for single-cell RNA-seq data that can learn an underlying latent space, integrate technical batches and impute dropouts. The learned low-dimensional latent representation of the data can be used for visualization and clustering.

Active05 months ago

Stereoscope is a variational inference model for single-cell RNA-seq data that can learn a cell-type specific rate of gene expression. The predictions of the model are meant to be afterward used for deconvolution of a second spatial transcriptomics dataset in Stereoscope.

Active05 months ago