SliverWorkspace

SliverWorkspace is a next-generation graphical (low-code) bioinformatics platform for designing, running and monitoring NGS analysis pipelines - from sequencer output to final analysis reports. It provides a visual DAG workflow engine built on declarative I/O, shell commands and variable interpolation, supports WDL, Snakemake and Nextflow workflows, ships production-ready pipelines following GATK best practices (germline SNV/Indel, somatic SNV/Indel/CNV/SV, Panel of Normals, RNA-Seq SNV/Indel), integrates an IGV-based genome browser, a drag-and-drop report designer, role-based access control and cluster scheduling (TORQUE/PBS, Slurm). Results are stored in a database in standard formats to support data mining and regression analysis.