SLAPNAP
github.com/benkeser/slapnapA Containerized Tool for Predicting Combination Monoclonal Broadly Neutralizing Antibody Sensitivity. Super LeArner Predictions using NAb Panels. slapnap is a Docker image for developing cross-validation-based ensemble predictors of neutralization sensitivity/resistance using HIV sequences from the CATNAP database. The image provides an automated tool for reading the data from the online database, compiling analytic data sets, developing prediction models, and summarizing results. The slapnap container is a tool for using the Compile, Analyze and Tally NAb Panels (CATNAP) database to develop predictive models of HIV-1 neutralization sensitivity to one or several broadly neutralizing antibodies (bnAbs).
Sourced from
- GitHub — github.com/benkeser/slapnap
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