scPRINT (Nature Communications 2025)
github.com/cantinilab/scprintLarge transformer-based single-cell foundation model pretrained on 50 million cells for robust gene network inference, expression denoising, cell embedding, and zero-shot label prediction, leveraging ESM2 protein embeddings and bidirectional transformer architecture (Cantini Lab, 148+ stars, GPL-3.0)
Sourced from
- Awesome AI for Science — github.com/cantinilab/scprint
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