sBEE: Single-cell Batch Effect Evaluator

github.com/tastanlab/sbee
Active0updated 2 months ago
Python

sBEE is a novel metric designed to robustly evaluate batch mixing in single-cell RNA sequencing (scRNA-seq) data. It assesses integration quality by combining local neighborhood composition and cross-batch distance relationships to provide stable benchmarking across diverse data characteristics.

Sourced from

  • GitHub — github.com/tastanlab/sbee