sBEE: Single-cell Batch Effect Evaluator
github.com/tastanlab/sbeesBEE is a novel metric designed to robustly evaluate batch mixing in single-cell RNA sequencing (scRNA-seq) data. It assesses integration quality by combining local neighborhood composition and cross-batch distance relationships to provide stable benchmarking across diverse data characteristics.
Sourced from
- GitHub — github.com/tastanlab/sbee