ReQFlow

github.com/angxiaoyue/reqflow
Idle85updated 6 months ago
Python

Rectified Quaternion Flow for efficient protein backbone generation, 37× faster than RFDiffusion with 0.972 designability (ICML 2025)

Sourced from

  • Awesome AI for Sciencegithub.com/angxiaoyue/reqflow
  • GitHubgithub.com/angxiaoyue/reqflow

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