pSpatiocyte
github.com/satya-arjunan/pspatiocytea high-performance simulator for intracellular reaction-diffusion systems. a lattice-based particle simulator. Lattice-based stochastic particle simulator. Spatiocyte — A lattice-based particle simulator. Simulate with mass action, Gillespie Next-Reaction and lattice-based particle diffusion and reaction algorithms simultaneously. Three-dimensional diffusion and reaction in a cubic volume. Parallel version of Spatiocyte (pSpatiocyte): Github