pathway parameter advising
github.com/gitter-lab/pathway-parameter-advisingAutomating parameter selection to avoid implausible biological pathway models. Parameter advising for biological pathway creation algorithms. Pathway parameter advising is described in the following preprint:. Pathway parameter advising was written and tested using Python 3.6 and requires the packages networkx and numpy. The runPPA.sh and setupPGD.sh scripts require git. These scripts have only been tested in a Linux environment initially