NAP-CNB

Bioinformatic pipeline to predict MHC-I-restricted T cell epitopes in mice. NeoAntigens Prediction @ CNB (NAP-CNB) is a tool for the prediction of neoantigenic peptides from tumoral RNA-seq or peptide sequences. NAP-CNB uses variant calling methods with models trained on recurrent neuronal networks (RNN) to produce a list of putative neoantigens.