MQuad
github.com/single-cell-genetics/mquadMQuad (Mixture Model for Mitochondrial Mutation detection in single-cell omics data) is a tool that detects mitochondrial mutations that are informative for clonal substructure inference. MQuad enables clonal substructure discovery using single cell mitochondrial variants. It uses a binomial mixture model to assess the heteroplasmy of mtDNA variants among background noise.