MPLID

github.com/omagefolorunsho/mplid

Membrane Protein-Lipid Interaction Database. A large-scale experimentally validated dataset of 80685 residue-level lipid contact annotations across 4712 membrane proteins derived from PDB crystal and cryo-EM structures. Provides pre-computed binary contact labels, continuous distance values, sequence-identity-based cluster assignments, and ready-made train-validation-test splits for machine learning.

Sourced from

  • bio.toolsMPLID
  • GitHubgithub.com/omagefolorunsho/mplid

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