miRge3

A comprehensive microRNA and tRF sequencing analysis pipeline. An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output. Enables building small-RNA libraries for the organism of choice to use in the miRge pipeline.