MicrobeAnnotator

A user-friendly, comprehensive microbial genome annotation pipeline. Easy-to-use pipeline for the comprehensive metabolic annotation of microbial genomes. MicrobeAnnotator uses an iterative approach to annotate microbial genomes (Bacteria, Archaea and Virus) starting from proteins predicted using your favorite ORF prediction tool, e.g. Prodigal. The iterative approach is composed of three or five main steps (depending on the flavor of MicrobeAnnotator you run).