genesisml/decaf

Mirror of the Boltz-2 structure- and affinity-prediction weights, packaged for use with tt-bio on Tenstorrent hardware. The files are byte-for-byte identical to the upstream Boltz-2 release; this repo simply hosts them on the Hugging Face Hub so tt-bio can fetch them with huggingface_hub like every…

Senba is a source-anchored adaptation of MarS-FM (Valence Labs, ICLR 2026) for mdCATH backbone transitions at 450 K and one 50-frame lag. It is published as a validation-stage candidate together with the selection receipt, every comparison, and the preregistered protocols, so the claim below can be…

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ESMFold2 is a state-of-the-art model for protein structure prediction and design that defines a new frontier for speed and accuracy. The model predicts high-resolution, all-atom 3D protein structures directly from amino acid sequences, with optional multiple sequence alignment (MSA) input for…

This repository contains the PyTorch model weights for MarS-FM (Markov Space Flow Matching) trained on the MD-CATH dataset. This model was introduced in the ICLR 2026 paper: MarS-FM: Generative Modeling of Molecular Dynamics via Markov State Models.

JAX/Equinox parameters for Promera, a dual-purpose biomolecular generative model for structure prediction and binder design. These weights were converted module-by-module from the official PyTorch checkpoint bjing-mit/promera (promera_2606.ckpt) and validated numerically against it (per-module…