CaImAn (Flatiron Institute)
github.com/flatironinstitute/caimanComputational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization, using machine learning for automated neuron detection and activity inference in two-photon and one-photon calcium imaging data (723+ stars, actively maintained)
Sourced from
- GitHub — github.com/flatironinstitute/caiman
- Awesome AI for Science — github.com/flatironinstitute/caiman
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