Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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## Model Description The "Bird Species Classifier" is a state-of-the-art image classification model designed to identify various bird species from images. It uses the EfficientNet architecture and has been fine-tuned to achieve high accuracy in recognizing a wide range of bird species.
A Vision Transformer (ViT) image classification model. \ Trained on 2M histology patches from TCGA-BRCA.
QuiltNet-B-32 is a CLIP ViT-B/32 vision-language foundation model trained on the Quilt-1M dataset curated from representative histopathology videos. It can perform various vision-language processing (VLP) tasks such as cross-modal retrieval, image classification, and visual question answering.
Tonic/mistralmed
by TonicThis is a medicine-focussed mistral fine tuned using keivalya/MedQuad-MedicalQnADataset
Galahad3x/QAModelForPatho
by Galahad3xQuestion Answering Model for the PathoTHREAT Project
Pre-trained weights and exported models for our spine segmentation project. The source code, designed to reproduce our test results and facilitate training and running inference on your own data, is available on GitHub: https://github.com/MMIV-ML/fastMONAI/tree/master/research
MentaLLaMA-chat-7B is part of the MentaLLaMA project, the first open-source large language model (LLM) series for interpretable mental health analysis with instruction-following capability. This model is finetuned based on the Meta LLaMA2-chat-7B foundation model and the full IMHI instruction…
This model may be overfit to some extent (see below). Try running this notebook on the datasets linked to in the notebook. See if you can figure out why the metrics differ so much on the datasets. Is it due to something like sequence similarity in the train/test split?
ayoubkirouane/Med_English2Spanish
by ayoubkirouane+ Model Name: Med_English2Spanish + Model Type: Transformer-based Neural Machine Translation (NMT) Model + Task: English to Spanish Medical Translation
This model is a fine-tuned model based on the Llama 2_7b architecture. It has been specifically trained on a dataset comprising USMLE (United States Medical Licensing Examination) questions and answers, as well as conversations between doctors and patients.
Intae/mymodel
by Intae项目地址:https://github.com/iioSnail/chinesemedicalner
This is a Japanese RoBERTa base model pre-trained on academic articles in medical sciences collected by Japan Science and Technology Agency (JST).
I present a demo showcasing retinal vessel segmentation using the U-Net model, which is a well-known and widely used model in medical image segmentation. The model was trained on the DRIVE dataset, and the training process was conducted on Google Colab.
datasets: - UMLS
In recent years, pre-trained language models (PLMs) achieve the best performance on a wide range of natural language processing (NLP) tasks. While the first models were trained on general domain data, specialized ones have emerged to more effectively treat specific domains.
Dr-BERT/DrBERT-4GB-CP-CamemBERT
by Dr-BERTIn recent years, pre-trained language models (PLMs) achieve the best performance on a wide range of natural language processing (NLP) tasks. While the first models were trained on general domain data, specialized ones have emerged to more effectively treat specific domains.
Dr-BERT/DrBERT-4GB
by Dr-BERTIn recent years, pre-trained language models (PLMs) achieve the best performance on a wide range of natural language processing (NLP) tasks. While the first models were trained on general domain data, specialized ones have emerged to more effectively treat specific domains.
Dr-BERT/DrBERT-7GB
by Dr-BERTIn recent years, pre-trained language models (PLMs) achieve the best performance on a wide range of natural language processing (NLP) tasks. While the first models were trained on general domain data, specialized ones have emerged to more effectively treat specific domains.
# Model Description This model is a fine-tuned version of BioBERT on the NCBI disease dataset for named entity recognition (NER) of diseases. It can be used to extract disease mentions from unstructured text in the medical and biological domains.
samkenxstream/HierarchyMartialsAI
by samkenxstreamtinnerofkors/kors
by tinnerofkorsmicrosoft/BioGPT-Large
by microsoftPre-trained language models have attracted increasing attention in the biomedical domain, inspired by their great success in the general natural language domain. Among the two main branches of pre-trained language models in the general language domain, i.e.
openskies2009/PeternewModelhere
by openskies2009K8778/universe
by K8778SamKenX-Hub-Community/SamKenXAI-engine-compiting
by SamKenX-Hub-CommunityThis modelcard aims to be a base template for new models. It has been generated using this raw template.
csimonmeunier/test-model
by csimonmeuniercosmobaby/ka
by cosmobabySevenlee/kkk
by Sevenlee# ChemGPT 1.2B ChemGPT is based on the GPT-Neo model and was introduced in the paper Neural Scaling of Deep Chemical Models.
# ChemGPT 19M ChemGPT is based on the GPT-Neo model and was introduced in the paper Neural Scaling of Deep Chemical Models.
# ChemGPT 4.7M ChemGPT is based on the GPT-Neo model and was introduced in the paper Neural Scaling of Deep Chemical Models.
TencentMedicalNet/MedicalNet-Resnet50
by TencentMedicalNet# MedicalNet This repository contains a Pytorch implementation of Med3D: Transfer Learning for 3D Medical Image Analysis. Many studies have shown that the performance on deep learning is significantly affected by volume of training data.
Deep learning for chemistry and materials science remains a novel field with lots of potiential. However, the popularity of transfer learning based methods in areas such as NLP and computer vision have not yet been effectively developed in computational chemistry + machine learning.