Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

672 of 6,565 resources

Showing 451500

Idle01 year ago

Highly focused on medical Training datasets ; + Upgraded inplace

Idle1201 year ago
Python

This model classifies facial skin images into 6 common dermatological conditions using a fine-tuned EfficientNetV2B0 architecture.

Idle811 year ago
Python

darkknight25/deepseek-16b-medical-GPT is a fine-tuned version of deepseek-ai/deepseek-l6b-moe-chat, optimized for medical question answering, reasoning, and clinical summarization using QLoRA and open-access healthcare datasets.

Idle01 year ago
Python

Unsloth Dynamic 2.0 achieves superior accuracy & outperforms other leading quants.

Idle17.7K1 year ago
Python

This is a merge of pre-trained language models created using mergekit, combining the specialty and general reasoning skills of Esper 3 8b and Shining Valiant 3 8b.

Idle151 year ago
Python

Using llama.cpp release b5868 for quantization.

Idle4.1K1 year ago

For a convenient overview and download list, visit our model page for this model.

Idle3.6K1 year ago
Python

For a convenient overview and download list, visit our model page for this model.

Idle4651 year ago
Python

For a convenient overview and download list, visit our model page for this model.

Idle4281 year ago
Python

Segment Anything in 3D Medical Images and Videos

Idle9911 year ago

> A CMR-report contrastive model combining Vision Transformers and pretrained text encoders.

Idle141 year ago

Unsloth Dynamic 2.0 achieves superior accuracy & outperforms other leading quants.

Idle6K1 year ago
Python
Idle3.8K1 year ago
Python

This repository contains pre-trained models from RadImageNet, a large-scale radiologic image dataset designed to facilitate transfer learning for medical imaging applications.

Idle01 year ago

!image # Compumacy-Experimental_MF ## A Specialized Language Model for Clinical Psychology & Psychiatry

Idle291 year ago
Python

Welcome to IBM's series of large foundation models for sustainable materials. Our models span a variety of representations and modalities, including SMILES, SELFIES, 3D atom positions, 3D density grids, molecular graphs, and other formats.

Idle2121 year ago
Python
Idle1.8K1 year ago
Python
Idle2311 year ago
Python
Idle2421 year ago
Python
Idle8.1K1 year ago
Python
Idle24K1 year ago
Python

This is the official pre-trained model introduced in DNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species Genome .

Idle535.6K1 year ago
Python
Idle01 year ago

!ether0 logo

Idle2951 year ago

> [!IMPORTANT] > 🎉 Check out the latest version of Phikon here: Phikon-v2 > > Phikon is a self-supervised learning model for histopathology trained with iBOT.

Idle19.8K1 year ago
Python

# Model details ## Model description Nature Language Model (NatureLM) is a sequence-based science foundation model designed for scientific discovery. Pre-trained with data from multiple scientific domains, NatureLM offers a unified, versatile model that enables various applications including…

Idle171 year ago

# Model details ## Model description Nature Language Model (NatureLM) is a sequence-based science foundation model designed for scientific discovery. Pre-trained with data from multiple scientific domains, NatureLM offers a unified, versatile model that enables various applications including…

Idle2611 year ago

An Evolutionary-scale Model (ESM) for protein function prediction from amino acid sequences using the Gene Ontology (GO). Based on the ESM2 Transformer architecture, pre-trained on UniRef50, and fine-tuned on the AmiGO dataset, this model predicts the GO subgraph for a particular protein sequence -…

Idle281 year ago
Python

Model documentation: MedGemma

Idle141 year ago
Python

An Evolutionary-scale Model (ESM) for protein function prediction from amino acid sequences using the Gene Ontology (GO). Based on the ESM2 Transformer architecture, pre-trained on UniRef50, and fine-tuned on the AmiGO dataset, this model predicts the GO subgraph for a particular protein sequence -…

Idle151 year ago
Python

An Evolutionary-scale Model (ESM) for protein function prediction from amino acid sequences using the Gene Ontology (GO). Based on the ESM2 Transformer architecture, pre-trained on UniRef50, and fine-tuned on the AmiGO dataset, this model predicts the GO subgraph for a particular protein sequence -…

Idle251 year ago
Python

An Evolutionary-scale Model (ESM) for protein function prediction from amino acid sequences using the Gene Ontology (GO). Based on the ESM2 Transformer architecture, pre-trained on UniRef50, and fine-tuned on the AmiGO dataset, this model predicts the GO subgraph for a particular protein sequence -…

Idle281 year ago
Python

An Evolutionary-scale Model (ESM) for protein function prediction from amino acid sequences using the Gene Ontology (GO). Based on the ESM2 Transformer architecture, pre-trained on UniRef50, and fine-tuned on the AmiGO dataset, this model predicts the GO subgraph for a particular protein sequence -…

Idle1781 year ago
Python

This model had been created as part of joint research of HUMADEX research group (https://www.linkedin.com/company/101563689/) and has received funding by the European Union Horizon Europe Research and Innovation Program project SMILE (grant number 101080923) and Marie Skłodowska-Curie Actions…

Idle1.8K1 year ago

This model had been created as part of joint research of HUMADEX research group (https://www.linkedin.com/company/101563689/) and has received funding by the European Union Horizon Europe Research and Innovation Program project SMILE (grant number 101080923) and Marie Skłodowska-Curie Actions…

Idle3011 year ago

An Evolutionary-scale Model (ESM) for protein function prediction from amino acid sequences using the Gene Ontology (GO). Based on the ESM2 Transformer architecture, pre-trained on UniRef50, and fine-tuned on the AmiGO dataset, this model predicts the GO subgraph for a particular protein sequence -…

Idle1201 year ago
Python

CineMA is a foundation model for Cine cardiac magnetic resonance (CMR) imaging based on Masked-Autoencoder. CineMA has been pre-trained on UK Biobank data and fine-tuned on multiple clinically relevant tasks such as ventricle and myocaridum segmentation, ejection fraction (EF) regression,…

Idle01 year ago

FloraSense is a fine-tuned Vision Transformer (ViT) model designed for accurate classification of plant species and flora-related imagery. It builds on top of the powerful google/vit-base-patch16-224 base model and is fine-tuned on the PlanterGARDENEDITION dataset curated by Sisigoks, which…

Idle2481 year ago
Python

FineMedLM-o1

Idle151 year ago
Python

!467.png

Idle37.5K1 year ago
Python

Using llama.cpp release b5466 for quantization.

Idle1.6K1 year ago

Using llama.cpp release b5466 for quantization.

Idle4.3K1 year ago

Dans-PersonalityEngine-V1.3.0-24b Dans-PersonalityEngine-V1.3.0-24b ⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢀⠀⠄⠀⡂⠀⠁⡄⢀⠁⢀⣈⡄⠌⠐⠠⠤⠄⡀⠀⠀⠀⠀⠀⠀⠀⠀⠀ ⠀⠀⠀⠀⠀⠀⠀⠀⡄⠆⠀⢠⠀⠛⣸⣄⣶⣾⡷⡾⠘⠃⢀⠀⣴⠀⡄⠰⢆⣠⠘⠰⠀⡀⠀⠀⠀⠀⠀ ⠀⠀⠀⠀⠀⠀⠀⠀⠀⠃⠀⡋⢀⣤⡿⠟⠋⠁⠀⡠⠤⢇⠋⠀⠈⠃⢀⠀⠈⡡⠤⠀⠀⠁⢄⠀⠀⠀⠀ ⠀⠀⠀⠀⠀⠁⡂⠀⠀⣀⣔⣧⠟⠋⠀⢀⡄⠀⠪⣀⡂⢁⠛⢆⠀⠀⠀⢎⢀⠄⢡⠢⠛⠠⡀⠀⠄⠀⠀ ⠀⠀⡀⠡⢑⠌⠈⣧⣮⢾⢏⠁⠀⠀⡀⠠⠦⠈⠀⠞⠑⠁⠀⠀⢧⡄⠈⡜⠷⠒⢸⡇⠐⠇⠿⠈⣖⠂⠀…

Idle2.9K1 year ago
Python

Dans-PersonalityEngine-V1.3.0-12b Dans-PersonalityEngine-V1.3.0-12b ⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⠀⢀⠀⠄⠀⡂⠀⠁⡄⢀⠁⢀⣈⡄⠌⠐⠠⠤⠄⡀⠀⠀⠀⠀⠀⠀⠀⠀⠀ ⠀⠀⠀⠀⠀⠀⠀⠀⡄⠆⠀⢠⠀⠛⣸⣄⣶⣾⡷⡾⠘⠃⢀⠀⣴⠀⡄⠰⢆⣠⠘⠰⠀⡀⠀⠀⠀⠀⠀ ⠀⠀⠀⠀⠀⠀⠀⠀⠀⠃⠀⡋⢀⣤⡿⠟⠋⠁⠀⡠⠤⢇⠋⠀⠈⠃⢀⠀⠈⡡⠤⠀⠀⠁⢄⠀⠀⠀⠀ ⠀⠀⠀⠀⠀⠁⡂⠀⠀⣀⣔⣧⠟⠋⠀⢀⡄⠀⠪⣀⡂⢁⠛⢆⠀⠀⠀⢎⢀⠄⢡⠢⠛⠠⡀⠀⠄⠀⠀ ⠀⠀⡀⠡⢑⠌⠈⣧⣮⢾⢏⠁⠀⠀⡀⠠⠦⠈⠀⠞⠑⠁⠀⠀⢧⡄⠈⡜⠷⠒⢸⡇⠐⠇⠿⠈⣖⠂⠀…

Idle661 year ago
Python

Dans-PersonalityEngine-V1.1.0-12b This model series is intended to be multifarious in its capabilities and should be quite capable at both co-writing and roleplay as well as find itself quite at home performing sentiment analysis or summarization as part of a pipeline.

Idle241 year ago
Python