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A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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160 of 7,064 resources
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A suite of algorithms for matching position weight matrices (PWM) against DNA sequences. It features advanced matrix matching algorithms implemented in C++ that can be used to scan hundreds of matrices against chromosome-sized sequences in few seconds. MOODS can also process high-order PWMs with dependencies between adjacent positions and sequence variants such as SNPs, insertions and deletions.
Open source web framework for small molecule analysis based on Django.
Learning nonlinear operators
AI for chemical reaction prediction and synthesis planning
FASTQ/A short-reads pre-processing tools: Demultiplexing, trimming, clipping, quality filtering, and masking utilities.
Finds SNP sites from a multi-FASTA alignment file.
Customizable pipeline for differential expression analysis with an intuitive GUI.
Flexible circular visualization of genome-associated data with BioPerl and SVG.
Horizon chart D3-based JavaScript library for DNA data.