Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

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Predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.

Active3612 months ago
Python
LGPL-2.1

Deep learning library for solving PDEs

Active4.2K3 months ago
Python
LGPL-2.1

Rank results by confident effect sizes, while maintaining False Discovery Rate and False Coverage-statement Rate control. Topconfects is an alternative presentation of TREAT results with improved usability, eliminating p-values and instead providing confidence bounds. The main application is differential gene expression analysis, providing genes ranked in order of confident log2 fold change, but it can be applied to any collection of effect sizes with associated standard errors.

Idle151 year ago
R
LGPL-2.1