Find open-source science resources

A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.

6 of 6,358 resources

This tool estimates the completeness of KEGG pathway modules from the presence or absence of KEGG orthologues (KOs)

Active403 weeks ago
Shell
Apache-2.0

linkset-automation is a set of tools to automatically generates CyTargetLinker linksets from different resources, starting with WikiPathways.

Active01 month ago
Shell
Apache-2.0

SMBGC Annotation using Neural Networks Trained on Interpro Signatures

Active304 months ago
Shell
Apache-2.0

Efficient foundation model and benchmark for multi-species genome understanding with context-aware nucleotide representations, improving upon DNABERT for diverse genomic task transfer learning (UIUC MAGICS Lab, 484+ stars)

Idle5016 months ago
Shell
Apache-2.0
Archived762 years ago
Shell
Apache-2.0

Virtual machine with all software and sample data to run 3D-e-Chem Knime workflows

Stale177 years ago
Shell
Apache-2.0