Find open-source science resources
A directory of tools, AI models, datasets, and research resources for biotech, bioinformatics, and other scientific fields. Aggregated from curated GitHub awesome-lists, HuggingFace, bio.tools, Bioconductor, and more.
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6 of 6,358 resources
This tool estimates the completeness of KEGG pathway modules from the presence or absence of KEGG orthologues (KOs)
linkset-automation is a set of tools to automatically generates CyTargetLinker linksets from different resources, starting with WikiPathways.
SMBGC Annotation using Neural Networks Trained on Interpro Signatures
Efficient foundation model and benchmark for multi-species genome understanding with context-aware nucleotide representations, improving upon DNABERT for diverse genomic task transfer learning (UIUC MAGICS Lab, 484+ stars)
Virtual machine with all software and sample data to run 3D-e-Chem Knime workflows